Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923928.1_cds_XP_016472399.1_64638
CDS Infomation

[gene=LOC107794426] [db_xref=GeneID:107794426] [protein=RING-H2 finger protein ATL43-like] [protein_id=XP_016472399.1] [location=16278..17630] [gbkey=CDS]
Sequence

ATGGGCATGATTTTCAATGTTCATTTTCTTTTGCCTTCTCTCTGGCTCTTCTTCTTCTTC
TTGAACACTCCTCAAACTATTACCTATGCACAAATTGCTCAAACCCCATTTTCTTCTACA
CCATTTTTAACAACCCCACCACCCCAACCTCCCACCCCATATAGATCTAGAGAATCACCA
TTTAGACCAAGCATAGCAGTAGTTGTAGCAATTCTCACAACAATTTTTTCCATCACATTT
TTATTACTCTTATATGCAAAACATTGTAAGAGGGGTCCATTCGGAACCACCACCACCACT
GCCGCCTACGGCGGAGGAGGAGTTCCGCCGCGGTCAAGCTTCAGAAAAAACTCTGGTATT
GACCGTACGGTGATTGAATCTTTACCCGTTTTTAGATTCGGGTCTCTCAGGGGGCCTAAA
GCAGAGGCTTTGGAATGCGCTGTTTGCTTGAACAAATTCGAAAACAGTGAAATCCTACGG
TTATTACCCAAATGCAAACACGCATTTCACGTTGAGTGTGTGGATACTTGGCTTGATGCA
CATTCCACGTGTCCTCTTTGTCGTTACAAAGTTGACCCAGAAGATATTCTTCTTATCTCA
CATGAAAATAATGGTCCCCAATTAGAGAGAAAATCTTTTTCAAATTCTACGTCATCATCG
CCGGCGAAAGAAAACAAGAGGATTTATTCGTCGGGAAGACATTCGTCGGCCGGAGAAAGA
GGAAGTTCGTCGTTACAGATAATAGTAGAAACTCCAAAAGAGGAAAATGGTGGAACGGCG
TCGTTTTTGAATAAAAGAATGTCGTTAGACAGTTGGAATTTTTACAAGAAAAAATGTAAG
TCCACTAACTCAATATCATCAAGGAGAAAAGATACGATGTTATTACCGGCGCCGGAAAAA
AATAACCACCGTATAGATGCGGCGGAGGATGTAGCGGAGCAAAGGCGGCTGGAACACCGG
ATAATAATTTATGGGGATGAATCAGAGGACAGGTCAGCAAGTGGGGCCCAATATAGATGG
AGTGACGTGGAAGCTTGTGATATGTTGTTTTTACGGTCGGAGATGATATTGAGCGAGAGC
CGTAGATATTCGGGGTCGAGAAAATGGACGGCTGAGATTGAAAGAAGAAACTGTAATAGT
AATAGCGGGAGTGGCAGAGGAGTAATAAATGAGAGAAGCGTGTCGGAAATGACAGGTATG
AGTAGGTTTAGGAGCAATGAAGATGAAAGAGGAAGACAATTAGAGAGACAAAGACAAAGA
AGAGGAGCAGTAACGAGGTGGTTGGATTGGATTTCAAAATCACAATCTCTGTCTTTGCCA
GCTGCACCTTCTTCTACTTGTTCTGCAACTTGA

Peptide Sequence

PEP ID

XP_016472399.1
PEP Infomation

PREDICTED: RING-H2 finger protein ATL43-like [Nicotiana tabacum]
Sequence

MGMIFNVHFLLPSLWLFFFFLNTPQTITYAQIAQTPFSSTPFLTTPPPQPPTPYRSRESP
FRPSIAVVVAILTTIFSITFLLLLYAKHCKRGPFGTTTTTAAYGGGGVPPRSSFRKNSGI
DRTVIESLPVFRFGSLRGPKAEALECAVCLNKFENSEILRLLPKCKHAFHVECVDTWLDA
HSTCPLCRYKVDPEDILLISHENNGPQLERKSFSNSTSSSPAKENKRIYSSGRHSSAGER
GSSSLQIIVETPKEENGGTASFLNKRMSLDSWNFYKKKCKSTNSISSRRKDTMLLPAPEK
NNHRIDAAEDVAEQRRLEHRIIIYGDESEDRSASGAQYRWSDVEACDMLFLRSEMILSES
RRYSGSRKWTAEIERRNCNSNSGSGRGVINERSVSEMTGMSRFRSNEDERGRQLERQRQR
RGAVTRWLDWISKSQSLSLPAAPSSTCSAT

Transcript Sequence

Gene sequence data has not been registered.